NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE231289 Query DataSets for GSE231289
Status Public on Apr 30, 2023
Title TF ChIP-seq from HepG2 (ENCSR978DQT)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-Seq on HepG2

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR978DQT/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Apr 28, 2023
Last update date Jul 07, 2023
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM7256272 TF ChIP-seq from HepG2 (ENCLB647YTL)
GSM7256273 TF ChIP-seq from HepG2 (ENCLB269CRO)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE231289_ENCFF007WPS_conservative_IDR_thresholded_peaks_GRCh38.bed.gz 190.2 Kb (ftp)(http) BED
GSE231289_ENCFF026SDO_IDR_ranked_peaks_GRCh38.bed.gz 5.4 Mb (ftp)(http) BED
GSE231289_ENCFF051FGD_IDR_thresholded_peaks_GRCh38.bigBed 521.3 Kb (ftp)(http) BIGBED
GSE231289_ENCFF051SNP_fold_change_over_control_GRCh38.bigWig 676.0 Mb (ftp)(http) BIGWIG
GSE231289_ENCFF230UTM_conservative_IDR_thresholded_peaks_GRCh38.bigBed 435.3 Kb (ftp)(http) BIGBED
GSE231289_ENCFF367PET_IDR_ranked_peaks_GRCh38.bed.gz 4.9 Mb (ftp)(http) BED
GSE231289_ENCFF438RTZ_signal_p-value_GRCh38.bigWig 562.0 Mb (ftp)(http) BIGWIG
GSE231289_ENCFF624UXU_IDR_thresholded_peaks_GRCh38.bed.gz 243.7 Kb (ftp)(http) BED
GSE231289_RAW.tar 1.8 Gb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap