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Series GSE234747 Query DataSets for GSE234747
Status Public on Jun 17, 2023
Title Promoter Capture Hi-C of day 0 (D0) and day 7 (D7) 3T3-L1 cells before and after adipogenic treatment
Organism Mus musculus
Experiment type Other
Summary 3T3-L1 preadipocytes were differentiated into mature adipocytes using adipogenic differentiation media. Promoter Capture Hi-C at D0 (two days post confluency) and D7 of adipocyte differentiation was performed to analyse regulatory interactions.
 
Overall design Promoter CHi-C analysis of D0 and D7 3T3-L1 cells before and after adipogenic differentiation was performed on 3 replicates each
 
Contributor(s) Ionel S
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Submission date Jun 12, 2023
Last update date Jun 17, 2023
Contact name Borbala Mifsud
E-mail(s) bmifsud@hbku.edu.qa
Organization name Hamad Bin Khalifa University
Street address LAS Building, Education City
City Doha
ZIP/Postal code 0000
Country Qatar
 
Platforms (1)
GPL15103 Illumina HiSeq 1000 (Mus musculus)
Samples (6)
GSM7474210 CHi-C D0 rep1
GSM7474211 CHi-C D0 rep2
GSM7474212 CHi-C D0 rep3
Relations
BioProject PRJNA982843

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234747_mm9_baits.txt.gz 2.0 Mb (ftp)(http) TXT
GSE234747_significant_differential_interactions_D7_vs_D0.txt.gz 913.9 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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