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Series GSE236447 Query DataSets for GSE236447
Status Public on Jul 05, 2023
Title Gene expression profile of macrophages of monocytic origin and Kupffer cells under conditions of co-cultivation with Ito cells, endotheliocytes of sinusoidal capillaries of the liver and HGF.
Organism Mus musculus
Experiment type Expression profiling by array
Summary The aim of the work was to study the expression profile of Kupffer cells and macrophages of monocytic origin under conditions of co-cultivation with Ito cells, endotheliocytes of sinusoidal capillaries of the liver and HGF. To test the hypothesis that it is the microenvironment that forms the specific phenotype of resident organ macrophages.
We used microarrays for comparison of Kupffer cells and macrophages of monocytic origin gene expression on different time periods of cocultivation with Ito cells, endotheliocytes of sinusoidal capillaries of the liver and HGF.
 
Overall design Kupffer cells were obtained by magnetic sorting from the liver of Balbc male mice by the F4/80 antigen, and monocytes from the blood of the same mice by the CD115 marker. Next, the cells were preliminarily cultured for a 1 day with MCSF. Next, monocytic macrophages and Kupffer cells were co-cultivated for 1 or 3 days with Ito cells or sinusoidal endotheliocytes or HGF. Macrophages of monocytic origin or Kupffer cells that continued to be cultivated for 1 or 3 days in a medium containing MCSF served as controls. At the end of the required period, RNA was extracted from the cells, which was used for transcriptome analysis.
 
Contributor(s) Kuznetsova M, Vishnyakova P
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Submission date Jul 03, 2023
Last update date Jul 05, 2023
Contact name Polina Vishnyakova
E-mail(s) vpa2002@mail.ru
Organization name National Medical Research Center for Obstetrics, Gynecology and Perinatology
Street address Oparina 4
City Moscow
ZIP/Postal code 116571
Country Russia
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (48)
GSM7546699 F4/80_1day_biologycal rep_1
GSM7546700 F4/80_1day_biologycal rep_2
GSM7546701 F4/80_1day_biologycal rep_3
Relations
BioProject PRJNA990815

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236447_RAW.tar 65.2 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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