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Series GSE23673 Query DataSets for GSE23673
Status Public on Mar 27, 2011
Title ZNF703 overexpression and/or knockdown in the breast cancer cell line MCF-7
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The telomeric amplicon at 8p12 is common in ER+ breast cancers. Array-CGH and expression analyses of 1172 tumors revealed ZNF703/Zeppo1 was the single gene within the minimal amplicon and was amplified predominantly in the Luminal B subtype. Amplification was shown to correlate with increased gene and protein expression and was associated with a distinct expression signature and poor outcome. In the luminal MCF-7 cell line manipulation of ZNF703 expression altered transcription of genes also present within the primary tumor signature, including TGFBR2 (whose promoter was bound by ZNF703). Overexpression of ZNF703 rendered MCF-7 cells insensitive to TGFβ-induced suppression of mammosphere formation. Forced overexpression of ZNF703 in normal human breast epithelial cells enhanced the frequency of in vitro colony-forming cells from luminal progenitors. Together these data strongly point to ZNF703/Zeppo1 as a novel oncogene in Luminal B breast cancer.
 
Overall design MCF-7 breast cancer cell line was infected with ZNF703 overexpression (ZNF703) or control (HIV) virus and following GFP sorting of infected cells, were transfected with control siRNA (siC) or siRNA against endogenous ZNF703 (siZNF), resulting in four different conditions: siC_HIV, siC_ZNF, siZNF_HIV and siZNF-ZNF. RNA for each condition was harvested from triplicate plates.
 
Contributor(s) Holland D, Caldas C, Menon S
Citation(s) 21337521
Submission date Aug 17, 2010
Last update date Aug 16, 2018
Contact name Suraj Menon
E-mail(s) suraj.menon@cruk.cam.ac.uk
Organization name Cambridge Research Institute, Cancer Research UK
Street address Li Ka Shing Center, Robinson Way
City Cambridge
ZIP/Postal code CB2 0RE
Country United Kingdom
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (12)
GSM580644 MCF7.siC.ZNF 1
GSM580645 MCF7.siZNF.ZNF 1
GSM580646 MCF7.siC.hiv 1
Relations
BioProject PRJNA130809

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23673_RAW.tar 6.2 Mb (http)(custom) TAR
GSE23673_non-normalized.txt.gz 3.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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