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Series GSE236841 Query DataSets for GSE236841
Status Public on Feb 29, 2024
Title Human iPSC-derived pulmonary epithelial cells infected with SARS-CoV-2 variants in the micro-patterned culture plates [SARS-CoV-2]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We infected iPSC-derived pulmonary epithelial cells in the micro-patterned culture plate with the SARS-CoV-2 variants. Analyses of infected alveolar and airway epithelial cells, respectively, revealed the tropism of the variants.
 
Overall design The iPSC-derived pulmonary epithelial cells infected with SARS-CoV-2 variants in the micro-patten culture plate were obtained from the culture plates and each total RNA was collected and subjected to RNA-seq.
 
Contributor(s) Masui A, Gotoh S, Takayama K, Yamamoto T
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 07, 2023
Last update date Feb 29, 2024
Contact name Shimpei Gotoh
Organization name Kyoto University
Department Center for iPS cell Research and Application
Lab Gotoh Lab
Street address 53 Kawaharacho, Shogoin, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8507
Country Japan
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (24)
GSM7577928 Alveolar_mock_1 [SARS-CoV-2]
GSM7577929 Alveolar_mock_2 [SARS-CoV-2]
GSM7577930 Alveolar_mock_3 [SARS-CoV-2]
This SubSeries is part of SuperSeries:
GSE236842 Transcriptomes of human iPSC-derived alveolar and airway cells in the micro-patterned culture plates and their responses to SARS-CoV-2 variant infection
Relations
BioProject PRJNA992511

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236841_RawCounts_for_GEO_upload.txt.gz 1.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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