NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE23713 Query DataSets for GSE23713
Status Public on Aug 24, 2010
Title To compare the expression profile of CD8 T cells from mice vaccinated with Ad85A via the intranasal (IN) or intradermal (ID) routes isolated from lungs or spleen.
Organism Mus musculus
Experiment type Expression profiling by array
Summary In Balb/c mice, the presence of effector CD8 T cells in lungs after intra-nasal (IN) immunization with replication deficient recombinant Adenovirus expressing the 85A antigen from Mycobacterium tuberculosis (MTb) (Ad85A) correlates with protection against aerosol MTb infection. In order to identify differentially expressed transcripts which contribute to protection by IN immunized lung CD8 T cells, total RNA from CD8 T cells isolated from target tissue (lungs) and lymphoid organ (spleen ) after a protective (IN) and non-protective (intradermal, ID) immunization regime will be analyzed in a whole-genome microarray study.
 
Overall design Total RNA from CD8 T cells isolated from lungs or spleens of Balb/c mice 3 weeks post-immunization with Ad85A through the IN (protective) or ID (non-protective) route will be compared.
 
Contributor(s) Lee LN, Baban D, Tchilian EZ, Beverley PC
Citation(s) 20942964
Submission date Aug 19, 2010
Last update date Jan 16, 2019
Contact name Lian Ni Lee
E-mail(s) lian.lee@ndm.ox.ac.uk
Phone 01865 271247
Organization name University of Oxford
Department Nuffield Dept of Medicine
Lab Immunological Memory
Street address Peter Medawar Building, South Parks Road
City Oxford
ZIP/Postal code OX1 3SY
Country United Kingdom
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (12)
GSM585201 Lung CD8_IN_3wks_rep1
GSM585202 Lung CD8_IN_3wks_rep2
GSM585203 Lung CD8_IN_3wks_rep3
Relations
BioProject PRJNA130877

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23713_RAW.tar 15.8 Mb (http)(custom) TAR
GSE23713_non-normalized.txt.gz 4.7 Mb (ftp)(http) TXT
GSE23713_raw.txt.gz 6.0 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap