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Series GSE240055 Query DataSets for GSE240055
Status Public on Feb 16, 2024
Title Homeobox regulator Wilms tumour 1 (WT1) is displaced by androgen receptor at cis-regulatory sites in the endometrium of PCOS patients.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Polycystic ovary syndrome (PCOS) is a common gynaecological disorder, characterised by elevated circulating androgens and increased expression of androgen receptor (AR) and by downregulation of Wilms Tumour 1 in the endometrium, The objectives of this study are: 1) Understand the functional role of WT1 in regulating decidualization response in healthy endometrial tissue, and 2) understand how interactions between aberrant WT1 and AR expression in PCOS patients result in dysregulation of deciduallization processes
 
Overall design Endometrial stromal cells isolated from 3 healthy patients were pooled together, grown to confluency and treated with cAMP. One chromatin sample (containing genetic background from 3 different patients) was immunoprecipitated with an anti-WT antibody and subsequently submitted to ChIP-Seq
 
Contributor(s) James DW, Conlan RS, Quintella M
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Submission date Aug 03, 2023
Last update date Feb 17, 2024
Contact name David James
E-mail(s) d.w.james@swansea.ac.uk
Organization name Swansea University
Department Medical School
Lab RBGO
Street address Swansea University, Singleton Park
City Swansea
ZIP/Postal code SA28PP
Country United Kingdom
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM7680637 WT1_Fertile_hESC_ChIP
GSM7680638 Fertile_endom_Input_ChIP
Relations
BioProject PRJNA1001989

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE240055_RAW.tar 227.4 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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