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Series GSE240776 Query DataSets for GSE240776
Status Public on May 01, 2024
Title Extracellular vesicles from epicardial fat mediate long-distance heart-brain communication and promote atrial fibrillation associated cognitive impairment (EAT exosomal miRNA-seq and hippocampal mRNA-seq)
Organism Canis lupus familiaris
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary 2 weeks of rapid atrial pacing increased the release of epicardial adipose tissue (EAT) exosomes. The red fluorescence of Ad-CD63-RFP traces the increase of EAT exosomes in the canine hippocampus. RNA Sequencing showed that the differentially expressed genes of cfa-miR-22e in EAT exosomes were significantly increased, and its target gene of IL33 was down-regulated in the hippocampus. Exosomes secreted by EAT in AF model canine penetrate the BBB, and activate hippocampal microglia through cfa-miR-22e/IL33 signaling pathway, which may be related to the increased risk of cognitive impairment in AF.
 
Overall design To investigate the effect of atrial fibrillation on cognitive impairment, canines were randomly divided into the sham group, the pacing group. The miRNA was detected from EAT exosomes of canines in the sham group and the pacing group, and the mRNA was detected from hippocampal tissue in the same group of canines. The results of heart and brain sequencing were analyzed jointly
 
Contributor(s) Wang X, Ke Y, Cao Z, Zhao Q
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Submission date Aug 14, 2023
Last update date May 01, 2024
Contact name wang xuewen
E-mail(s) wangxuewen@whu.edu.cn
Phone +8618372030240
Organization name Renmin Hospital of Wuhan University
Department Department of Cardiology
Lab Cardiovascular Research Institute
Street address 238 Jiefang Road, Wuhan 430060, China
City Wuhan
State/province 中国 (+86)
ZIP/Postal code 430060
Country China
 
Platforms (1)
GPL33670 DNBSEQ-T7 (Canis lupus familiaris)
Samples (12)
GSM7709131 Pacing Hip-1, mRNA-seq
GSM7709132 Pacing Hip-2, mRNA-seq
GSM7709133 Pacing Hip-3, mRNA-seq
Relations
BioProject PRJNA1005232

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MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE240776_EAT_Exosomes_miRNA_TPM.txt.gz 6.2 Kb (ftp)(http) TXT
GSE240776_Hippocampus_All_samples_rpkm.txt.gz 4.2 Mb (ftp)(http) TXT
GSE240776_novel.miRNA.fa.gz 1.3 Kb (ftp)(http) FA
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