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Series GSE243865 Query DataSets for GSE243865
Status Public on Apr 26, 2024
Title Copanlisib Microarray Data
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Chemotherapy is the mainstay treatment stragety for triple negative breast cancer (TNBC). However resistance to chemotherapy is common, leading to disease progression and death. Strategies that improve chemotherapy efficacy has the potential to reduce TNBC mortality. In this research, we demonstrated that the pan-PI3K inhibitor copanlisib, which is already in clinic to treat hematologic malignancies, enhanced the cytotoxicity of eribulin, a common chemotherapy used to treat taxane-resistant TNBC, in a panel of TNBC patient-derived xenograft (PDX) models. The improved tumor growth inhibition was irrespective of PI3K pathway alteration and was corroborated by the enhanced apoptotic induction observed in PDX tumors post combination therapy compared to each drug alone. The combination therapy inhibited eribulin-induced PI3K pathway activation, providing an underlying mechanism of action for its enhanced anti-tumor effect. Based on these results, a Phase I/II trial of this combination in patients with metastatic TNBC was initiated and is ongoing.
 
Overall design 27 mRNA microarray experiments were analyzed for 8 different HIM lines. 5 of these lines had data from a patient biospy as well as multiple passages from a mouse xenograft. 3 tumors had data from mouse xenograft passages but no data from the patient biopsy. Each representative patient tumor sample and mouse xenograft passage was amplified, labeled, and co-hybridized with a reference sample.
 
Contributor(s) Hoog JW
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Submission date Sep 22, 2023
Last update date Apr 27, 2024
Contact name Cynthia Ma
E-mail(s) cynthiaxma@wustl.edu
Phone 3143628903
Organization name Washington University
Department Medical Oncology
Lab Dr. Cynthia Ma Lab
Street address 4515 Mckinley, 4515 Mckinley
City st louis
State/province Missouri
ZIP/Postal code 63627
Country USA
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (27)
GSM7797087 WHIM10_mouse passage A [re-analysis]
GSM7797088 WHIM10_mouse passage C [re-analysis]
GSM7797089 WHIM10_mouse passage D [re-analysis]
Relations
BioProject PRJNA1020187

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE243865_RAW.tar 393.9 Mb (http)(custom) TAR (of TXT)

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