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| Status |
Public on May 10, 2024 |
| Title |
Differential expression in Muller glia of injured zebrafish in a mych-/- context |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
This experiment studies retinal regeneration using a zebrafish model with a focus on Muller glia reprogramming.
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| Overall design |
Three groups: controls (Muller glia from uninjured retinas), injured WT (Muller glia from injured WT retina at 2 days post injury (dpi)), and injured mych-/- (Muller glia from injured mych-/- fish at 2dpi). Of interest are the WT injury responsive genes, and which injury-responsive genes in the WT are differentially expressed in the mych-/- fish.
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| Contributor(s) |
Goldman D |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Dec 01, 2023 |
| Last update date |
May 10, 2024 |
| Contact name |
Bioinformatics Core |
| E-mail(s) |
bioinformatics@umich.edu
|
| Organization name |
University of Michigan
|
| Street address |
BRCF Bioinformatics Core, 2800 Plymouth Rd
|
| City |
Ann Arbor |
| State/province |
Mi |
| ZIP/Postal code |
48109-2800 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL24995 |
Illumina NovaSeq 6000 (Danio rerio) |
|
| Samples (9)
|
| GSM7926862 |
Muller glia from uninjured WT retinas rep1 [5803-ML-1 ] |
| GSM7926863 |
Muller glia from uninjured WT retinas rep2 [5803-ML-2] |
| GSM7926864 |
Muller glia from uninjured WT retinas rep3 [5803-ML-3] |
| GSM7926865 |
Muller glia from WT retinas 2 days post injury (dpi) rep1 [5803-ML-4] |
| GSM7926866 |
Muller glia from WT retinas 2 days post injury (dpi) rep2 [5803-ML-5] |
| GSM7926867 |
Muller glia from WT retinas 2 days post injury (dpi) rep3 [5803-ML-6] |
| GSM7926868 |
Muller glia from mych-/- retinas 2 days post injury (dpi) rep1 [5803-ML-7] |
| GSM7926869 |
Muller glia from mych-/- retinas 2 days post injury (dpi) rep2 [5803-ML-8] |
| GSM7926870 |
Muller glia from mych-/- retinas 2 days post injury (dpi) rep3 [5803-ML-10] |
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| This SubSeries is part of SuperSeries: |
| GSE249117 |
Differential expression in Zebrafish retinal muller glia under injured and knockout |
|
| Relations |
| BioProject |
PRJNA1047750 |
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