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Series GSE25099 Query DataSets for GSE25099
Status Public on Sep 01, 2011
Title Expression data from 57 patients with oral cancer and 22 normal persons
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In order to aid the development of patient-tailored diagnostics and therapeutics, we attempted to identify a genetic signature associated with disease prognosis in OSCC. A genome-wide analysis of transcription with the Affymetrix GeneChip Human Gene 1.0 ST Array was conducted.
In this dataset, we include the expression data obtained from 57 specimens from patients with OSCC and 22 oral tissues from normal persons.
 
Overall design 79 samples were analyzed. We compared gene expression levels between patients with and without OSCC. In addition, among 57 patients with OSCC, we also compared the expression levels between patients with and without amplicons scattered in chromosome 8q22.2~24.3.
 
Contributor(s) Peng C, Liao C, Chen Y, Cheng A, Juang J, Tsai C, Hsieh W, Yen T
Citation(s) 21853135
Submission date Nov 03, 2010
Last update date Feb 18, 2019
Contact name Chien-Hua Peng
Organization name Chang Gung Memorial Hospital
Street address No. 5, Fu-Hsing ST.
City Taoyuan
ZIP/Postal code 33305
Country Taiwan
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (79)
GSM616583 Normal oral tissue_052CN
GSM616584 Normal oral tissue_47N
GSM616585 Normal oral tissue_50N
This SubSeries is part of SuperSeries:
GSE25104 Expression and SNP array data for oral squamous cell carcinoma
Relations
BioProject PRJNA142727

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25099_RAW.tar 1.7 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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