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Series GSE254934 Query DataSets for GSE254934
Status Public on May 01, 2024
Title ATAC-sequencing of Artemia cyst at 30min after embryonic diapause termination
Organism Artemia parthenogenetic lineage
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Embryonic diapause is a widely occurring evolutionary adaptation phenomenon in animals. Artemia is one of the classic animal models for diapause research. The current studies of Artemia diapause mainly focus on the induction and maintenance of the embryonic diapause, but there is little research on the molecular regulatory mechanism of Artemia embryonic diapause termination (EDT) and embryonic reactivation. Here the gene expression of Artemia cyst at 30min after embryonic diapause termination (EDT), which is in post-diapause stage were tested by ATAC-seq to analyze the mechanism of signal regulation involved in Artemia EDT at the molecular level.
 
Overall design ATAC-seq profiling of Artemia cyst at 30min after embryonic diapause termination (EDT) with the Illumina high-throughput sequencing technology by Novogene Inc.
 
Contributor(s) Hao T, Li A
Citation(s) 38666959
Submission date Feb 02, 2024
Last update date May 01, 2024
Contact name Tong Hao
E-mail(s) skyht@tjnu.edu.cn
Organization name College of Life Sciences, Tianjin Normal University
Department College of Life Sciences
Street address No.393
City Tianjin
State/province China
ZIP/Postal code 300387
Country China
 
Platforms (1)
GPL33946 Illumina NovaSeq 6000 (Artemia parthenogenetica)
Samples (3)
GSM8060404 ArR_30min_1, ATAC-seq
GSM8060405 ArR_30min_2, ATAC-seq
GSM8060406 ArR_30min_3, ATAC-seq
Relations
BioProject PRJNA1072660

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE254934_peak.xlsx 12.7 Mb (ftp)(http) XLSX
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Raw data are available in SRA

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