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Series GSE258176

Query DataSets for GSE258176

Status

Public on Feb 27, 2024

Title

Mint-ChIP-seq from H9 (ENCSR725YWL)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K27me3 Mint-ChIP-seq on human H9.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR725YWL/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 25, 2024

Last update date

Feb 27, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL16791

Illumina HiSeq 2500 (Homo sapiens)

Samples (6)

More...

GSM8109314	Mint-ChIP-seq from H9 (ENCLB688FSM)
GSM8109315	Mint-ChIP-seq from H9 (ENCLB392EMA)
GSM8109316	Mint-ChIP-seq from H9 (ENCLB651VVB)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE258176_ENCFF043GTQ_signal_p-value_GRCh38.bigWig	1.9 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF094VGS_replicated_peaks_GRCh38.bed.gz	2.3 Mb	(ftp)(http)	BED
GSE258176_ENCFF190QEK_replicated_peaks_GRCh38.bigBed	5.3 Mb	(ftp)(http)	BIGBED
GSE258176_ENCFF201AQD_replicated_peaks_GRCh38.bigBed	3.5 Mb	(ftp)(http)	BIGBED
GSE258176_ENCFF201SJZ_fold_change_over_control_GRCh38.bigWig	4.0 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF322CXR_signal_p-value_GRCh38.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF323LHD_replicated_peaks_GRCh38.bed.gz	2.0 Mb	(ftp)(http)	BED
GSE258176_ENCFF363FSG_pseudoreplicated_peaks_GRCh38.bed.gz	8.5 Mb	(ftp)(http)	BED
GSE258176_ENCFF420AUZ_fold_change_over_control_GRCh38.bigWig	1.0 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF425YDH_replicated_peaks_GRCh38.bigBed	4.6 Mb	(ftp)(http)	BIGBED
GSE258176_ENCFF442KPU_pseudoreplicated_peaks_GRCh38.bed.gz	9.0 Mb	(ftp)(http)	BED
GSE258176_ENCFF459BSM_fold_change_over_control_GRCh38.bigWig	2.0 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF506QMI_pseudoreplicated_peaks_GRCh38.bed.gz	5.4 Mb	(ftp)(http)	BED
GSE258176_ENCFF515LDQ_fold_change_over_control_GRCh38.bigWig	1.0 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF523REH_pseudoreplicated_peaks_GRCh38.bed.gz	8.1 Mb	(ftp)(http)	BED
GSE258176_ENCFF555LKJ_pseudoreplicated_peaks_GRCh38.bigBed	16.6 Mb	(ftp)(http)	BIGBED
GSE258176_ENCFF562EQI_signal_p-value_GRCh38.bigWig	2.5 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF655IFJ_pseudoreplicated_peaks_GRCh38.bigBed	10.0 Mb	(ftp)(http)	BIGBED
GSE258176_ENCFF781NKJ_replicated_peaks_GRCh38.bed.gz	1.8 Mb	(ftp)(http)	BED
GSE258176_ENCFF921TXH_pseudoreplicated_peaks_GRCh38.bigBed	13.9 Mb	(ftp)(http)	BIGBED
GSE258176_ENCFF930LSW_signal_p-value_GRCh38.bigWig	1.8 Gb	(ftp)(http)	BIGWIG
GSE258176_ENCFF957LNI_pseudoreplicated_peaks_GRCh38.bigBed	18.4 Mb	(ftp)(http)	BIGBED
GSE258176_RAW.tar	20.0 Kb	(http)(custom)	TAR (of TXT)
Raw data are available in SRA