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Series GSE258809

Query DataSets for GSE258809

Status

Public on Feb 27, 2024

Title

Histone ChIP-seq from BLaER1 (ENCSR472CMR)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K36me3 ChIP-Seq on BLaER1 cell line after 9 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR472CMR/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 25, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8110500	Histone ChIP-seq from BLaER1 (ENCLB717RJG)
GSM8110501	Histone ChIP-seq from BLaER1 (ENCLB651EPH)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE258809_ENCFF186RMK_signal_p-value_GRCh38.bigWig	1.6 Gb	(ftp)(http)	BIGWIG
GSE258809_ENCFF211XZC_peaks_GRCh38.bigBed	768.8 Kb	(ftp)(http)	BIGBED
GSE258809_ENCFF224VHH_replicated_peaks_GRCh38.bed.gz	2.5 Mb	(ftp)(http)	BED
GSE258809_ENCFF374DQQ_pseudoreplicated_peaks_GRCh38.bed.gz	2.7 Mb	(ftp)(http)	BED
GSE258809_ENCFF474TCT_replicated_peaks_GRCh38.bigBed	4.0 Mb	(ftp)(http)	BIGBED
GSE258809_ENCFF489PQP_fold_change_over_control_GRCh38.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE258809_ENCFF780XLQ_peaks_GRCh38.bed.gz	425.5 Kb	(ftp)(http)	BED
GSE258809_ENCFF964YTN_pseudoreplicated_peaks_GRCh38.bigBed	4.3 Mb	(ftp)(http)	BIGBED
GSE258809_RAW.tar	11.1 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA