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Series GSE258896

Query DataSets for GSE258896

Status

Public on Feb 27, 2024

Title

Histone ChIP-seq from BLaER1 (ENCSR808DPZ)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K4me3 ChIP-Seq on BLaER1 cell line after 6 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR808DPZ/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 25, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8110671	Histone ChIP-seq from BLaER1 (ENCLB963NVI)
GSM8110672	Histone ChIP-seq from BLaER1 (ENCLB760YJU)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE258896_ENCFF155SDV_replicated_peaks_GRCh38.bed.gz	845.0 Kb	(ftp)(http)	BED
GSE258896_ENCFF178OXP_peaks_GRCh38.bed.gz	129.8 Kb	(ftp)(http)	BED
GSE258896_ENCFF274QBI_replicated_peaks_GRCh38.bigBed	1.8 Mb	(ftp)(http)	BIGBED
GSE258896_ENCFF430UYD_peaks_GRCh38.bigBed	260.5 Kb	(ftp)(http)	BIGBED
GSE258896_ENCFF599NTX_pseudoreplicated_peaks_GRCh38.bigBed	2.0 Mb	(ftp)(http)	BIGBED
GSE258896_ENCFF653XPZ_pseudoreplicated_peaks_GRCh38.bed.gz	937.5 Kb	(ftp)(http)	BED
GSE258896_ENCFF697CVO_signal_p-value_GRCh38.bigWig	1.7 Gb	(ftp)(http)	BIGWIG
GSE258896_ENCFF958MKM_fold_change_over_control_GRCh38.bigWig	1.6 Gb	(ftp)(http)	BIGWIG
GSE258896_RAW.tar	9.2 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA