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Series GSE258984

Query DataSets for GSE258984

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from BLaER1 (ENCSR490DXW)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

CEBPA ChIP-Seq on BLaER1 cell line after 3 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR490DXW/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 25, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8110843	TF ChIP-seq from BLaER1 (ENCLB864AXW)
GSM8110844	TF ChIP-seq from BLaER1 (ENCLB569HAH)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE258984_ENCFF092IJW_IDR_ranked_peaks_GRCh38.bed.gz	5.5 Mb	(ftp)(http)	BED
GSE258984_ENCFF213VMF_conservative_IDR_thresholded_peaks_GRCh38.bed.gz	396.6 Kb	(ftp)(http)	BED
GSE258984_ENCFF285EDL_IDR_thresholded_peaks_GRCh38.bed.gz	441.2 Kb	(ftp)(http)	BED
GSE258984_ENCFF419NIR_signal_p-value_GRCh38.bigWig	1.3 Gb	(ftp)(http)	BIGWIG
GSE258984_ENCFF595PNT_IDR_ranked_peaks_GRCh38.bed.gz	5.6 Mb	(ftp)(http)	BED
GSE258984_ENCFF656BQF_peaks_GRCh38.bed.gz	1011.8 Kb	(ftp)(http)	BED
GSE258984_ENCFF757WNN_conservative_IDR_thresholded_peaks_GRCh38.bigBed	713.9 Kb	(ftp)(http)	BIGBED
GSE258984_ENCFF858JKM_IDR_thresholded_peaks_GRCh38.bigBed	770.9 Kb	(ftp)(http)	BIGBED
GSE258984_ENCFF892SJD_peaks_GRCh38.bigBed	1.5 Mb	(ftp)(http)	BIGBED
GSE258984_ENCFF969WQZ_fold_change_over_control_GRCh38.bigWig	1.3 Gb	(ftp)(http)	BIGWIG
GSE258984_RAW.tar	7.4 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA