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Series GSE259102

Query DataSets for GSE259102

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR511YXX)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing CG31441-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR511YXX/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 26, 2024

Last update date

Feb 27, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11203

Illumina Genome Analyzer IIx (Drosophila melanogaster)

Samples (2)

GSM8111105	TF ChIP-seq from whole organism (ENCLB068YFI)
GSM8111106	TF ChIP-seq from whole organism (ENCLB057AOZ)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE259102_ENCFF264XAJ_IDR_ranked_peaks_dm6.bed.gz	1.6 Mb	(ftp)(http)	BED
GSE259102_ENCFF290FGG_signal_p-value_dm6.bigWig	305.5 Mb	(ftp)(http)	BIGWIG
GSE259102_ENCFF412WVD_IDR_thresholded_peaks_dm6.bigBed	308.3 Kb	(ftp)(http)	BIGBED
GSE259102_ENCFF513NVD_IDR_ranked_peaks_dm6.bed.gz	1.6 Mb	(ftp)(http)	BED
GSE259102_ENCFF859PHW_fold_change_over_control_dm6.bigWig	356.7 Mb	(ftp)(http)	BIGWIG
GSE259102_ENCFF893TLK_conservative_IDR_thresholded_peaks_dm6.bed.gz	116.3 Kb	(ftp)(http)	BED
GSE259102_ENCFF921VCW_IDR_thresholded_peaks_dm6.bed.gz	131.0 Kb	(ftp)(http)	BED
GSE259102_ENCFF933ZCK_conservative_IDR_thresholded_peaks_dm6.bigBed	285.0 Kb	(ftp)(http)	BIGBED
GSE259102_RAW.tar	1.1 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA