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Series GSE259103

Query DataSets for GSE259103

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from BLaER1 (ENCSR827TOM)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

CEBPA ChIP-Seq on BLaER1 cell line after 6 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR827TOM/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 26, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8111107	TF ChIP-seq from BLaER1 (ENCLB420PNN)
GSM8111108	TF ChIP-seq from BLaER1 (ENCLB070AEC)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE259103_ENCFF260RKG_IDR_ranked_peaks_GRCh38.bed.gz	3.6 Mb	(ftp)(http)	BED
GSE259103_ENCFF276YRZ_conservative_IDR_thresholded_peaks_GRCh38.bigBed	441.5 Kb	(ftp)(http)	BIGBED
GSE259103_ENCFF387MWS_signal_p-value_GRCh38.bigWig	1.3 Gb	(ftp)(http)	BIGWIG
GSE259103_ENCFF399AYC_IDR_thresholded_peaks_GRCh38.bigBed	471.0 Kb	(ftp)(http)	BIGBED
GSE259103_ENCFF557QYP_conservative_IDR_thresholded_peaks_GRCh38.bed.gz	215.9 Kb	(ftp)(http)	BED
GSE259103_ENCFF645WWL_fold_change_over_control_GRCh38.bigWig	1.4 Gb	(ftp)(http)	BIGWIG
GSE259103_ENCFF665ZVE_IDR_thresholded_peaks_GRCh38.bed.gz	234.6 Kb	(ftp)(http)	BED
GSE259103_ENCFF906GPE_IDR_ranked_peaks_GRCh38.bed.gz	3.3 Mb	(ftp)(http)	BED
GSE259103_ENCFF944NEQ_peaks_GRCh38.bed.gz	338.5 Kb	(ftp)(http)	BED
GSE259103_ENCFF976UVI_peaks_GRCh38.bigBed	657.2 Kb	(ftp)(http)	BIGBED
GSE259103_RAW.tar	7.6 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA