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Series GSE259169

Query DataSets for GSE259169

Status

Public on Feb 27, 2024

Title

Histone ChIP-seq from BLaER1 (ENCSR524VDR)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K36me3 ChIP-Seq on untreated BLaER1 cell line.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR524VDR/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 26, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8111227	Histone ChIP-seq from BLaER1 (ENCLB580FXE)
GSM8111228	Histone ChIP-seq from BLaER1 (ENCLB842MWZ)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE259169_ENCFF177VSS_replicated_peaks_GRCh38.bed.gz	3.2 Mb	(ftp)(http)	BED
GSE259169_ENCFF261DMQ_peaks_GRCh38.bed.gz	636.8 Kb	(ftp)(http)	BED
GSE259169_ENCFF520LYW_replicated_peaks_GRCh38.bigBed	5.0 Mb	(ftp)(http)	BIGBED
GSE259169_ENCFF531ZXZ_signal_p-value_GRCh38.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE259169_ENCFF581OQV_pseudoreplicated_peaks_GRCh38.bed.gz	3.6 Mb	(ftp)(http)	BED
GSE259169_ENCFF754TNF_fold_change_over_control_GRCh38.bigWig	2.0 Gb	(ftp)(http)	BIGWIG
GSE259169_ENCFF857KNY_pseudoreplicated_peaks_GRCh38.bigBed	5.6 Mb	(ftp)(http)	BIGBED
GSE259169_ENCFF888PXS_peaks_GRCh38.bigBed	1.1 Mb	(ftp)(http)	BIGBED
GSE259169_RAW.tar	11.0 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA