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Series GSE259202

Query DataSets for GSE259202

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR532EVV)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing Dbx-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR532EVV/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 26, 2024

Last update date

Feb 27, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL25244

Illumina NovaSeq 6000 (Drosophila melanogaster)

Samples (3)

GSM8111282	TF ChIP-seq from whole organism (ENCLB611VNN)
GSM8111283	TF ChIP-seq from whole organism (ENCLB098MUF)
GSM8111284	TF ChIP-seq from whole organism (ENCLB446LZE)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE259202_ENCFF034VXL_fold_change_over_control_dm6.bigWig	323.0 Mb	(ftp)(http)	BIGWIG
GSE259202_ENCFF201QIY_IDR_ranked_peaks_dm6.bed.gz	4.3 Mb	(ftp)(http)	BED
GSE259202_ENCFF336KNX_IDR_thresholded_peaks_dm6.bigBed	268.3 Kb	(ftp)(http)	BIGBED
GSE259202_ENCFF394CRC_IDR_ranked_peaks_dm6.bed.gz	5.1 Mb	(ftp)(http)	BED
GSE259202_ENCFF395LWR_conservative_IDR_thresholded_peaks_dm6.bed.gz	87.8 Kb	(ftp)(http)	BED
GSE259202_ENCFF459URC_IDR_thresholded_peaks_dm6.bigBed	166.6 Kb	(ftp)(http)	BIGBED
GSE259202_ENCFF471DXE_IDR_thresholded_peaks_dm6.bed.gz	69.6 Kb	(ftp)(http)	BED
GSE259202_ENCFF603TSO_conservative_IDR_thresholded_peaks_dm6.bigBed	189.7 Kb	(ftp)(http)	BIGBED
GSE259202_ENCFF610AKH_signal_p-value_dm6.bigWig	267.9 Mb	(ftp)(http)	BIGWIG
GSE259202_ENCFF647QSN_IDR_thresholded_peaks_dm6.bed.gz	62.1 Kb	(ftp)(http)	BED
GSE259202_ENCFF677EGF_IDR_ranked_peaks_dm6.bed.gz	4.9 Mb	(ftp)(http)	BED
GSE259202_ENCFF729RXW_IDR_ranked_peaks_dm6.bed.gz	4.1 Mb	(ftp)(http)	BED
GSE259202_ENCFF783RRU_IDR_thresholded_peaks_dm6.bed.gz	111.9 Kb	(ftp)(http)	BED
GSE259202_ENCFF930GBH_IDR_thresholded_peaks_dm6.bigBed	156.5 Kb	(ftp)(http)	BIGBED
GSE259202_RAW.tar	1.3 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA