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Series GSE259210 Query DataSets for GSE259210
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR535LKO)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-pqm-1 in L3 larva worms.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR535LKO/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 26, 2024
Last update date Sep 02, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8111299 TF ChIP-seq from whole organism (ENCLB122OUE)
GSM8111300 TF ChIP-seq from whole organism (ENCLB947YBL)
Relations
Reanalyzed by GSE276166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE259210_ENCFF062GSE_optimal_IDR_thresholded_peaks_ce11.bigBed 204.7 Kb (ftp)(http) BIGBED
GSE259210_ENCFF266UKS_signal_of_unique_reads_ce11.bigWig 9.7 Mb (ftp)(http) BIGWIG
GSE259210_ENCFF274XKV_optimal_IDR_thresholded_peaks_ce11.bed.gz 103.0 Kb (ftp)(http) BED
GSE259210_ENCFF348JVC_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE259210_ENCFF355WJJ_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE259210_ENCFF360AYE_peaks_and_background_as_input_for_IDR_ce11.bed.gz 720.3 Kb (ftp)(http) BED
GSE259210_ENCFF444UXJ_signal_of_unique_reads_ce10.bigWig 9.7 Mb (ftp)(http) BIGWIG
GSE259210_ENCFF686ZOK_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE259210_ENCFF783ORY_optimal_IDR_thresholded_peaks_ce10.bigBed 201.3 Kb (ftp)(http) BIGBED
GSE259210_ENCFF809TCX_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE259210_ENCFF818SNZ_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE259210_ENCFF871OSW_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE259210_ENCFF910WQA_optimal_IDR_thresholded_peaks_ce10.bed.gz 100.1 Kb (ftp)(http) BED
GSE259210_ENCFF943NUV_peaks_and_background_as_input_for_IDR_ce10.bed.gz 724.8 Kb (ftp)(http) BED
GSE259210_RAW.tar 123.7 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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