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Series GSE264092 Query DataSets for GSE264092
Status Public on May 01, 2024
Title RKIP regulates bone homeostasis by mediating the differentiation fate of bone niche macrophages.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary As central cells involved in osteoimmunology, bone niche macrophages possess diverse functions, and their differentiation fate regulates bone homeostasis. Elucidation of the underlying mechanism involved in macrophage differentiation is important for developing new therapeutic targets for osteoporosis. Our RNA-seq data showed that the differentially expressed genes in BMMs after RKIP knockout were involved in the pathways of cell adhesion and osteoclast differentiation.
 
Overall design To investigate RKIP in the regulation of macrophage differentiation, we isolated BMMs from RKIP+/+ and RKIP-/- mice and performed transcriptome sequencing (RNA-seq). We then performed gene expression profiling analysis using data obtained from RNA-seq of 2 different cells.
 
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Submission date Apr 16, 2024
Last update date May 01, 2024
Contact name Fengdong Zhao
E-mail(s) zhaofengdong@zju.edu.cn
Phone 13858120759
Organization name Sir Run Run Shaw Hospital, Zhejiang University School of Medicine
Street address No. 3, Qingchun Road East
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310000
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM8210314 RKIP WT1
GSM8210315 RKIP WT2
GSM8210316 RKIP WT3
Relations
BioProject PRJNA1100972

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE264092_1_genes_fpkm_expression.txt.gz 6.4 Mb (ftp)(http) TXT
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Raw data are available in SRA

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