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Series GSE265787 Query DataSets for GSE265787
Status Public on May 01, 2024
Title Endothelial IGFBP6 Suppresses Vascular Inflammation and Atherosclerosis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary It has previously been reported that expression levels of insulin-like growth factor binding protein 6 (IGFBP6) are reduced in unstable plaques compared to stable plaques in patients with coronary heart disease (CAD). However, the exact role and mechanism of IGFBP6 in endothelial homeostasis and inhibition of focal atherosclerotic plaque development in vivo remains unclear. Transcripome sequencing and bioinformatics analysis of IGFBP6-overexpressed human umbilical vein endothelial cells (HUVECs) suggest that pathway analysis and differentially expressed mRNA may help clarify the role and potential mechanism of IGFBP6 in the treatment of cardiovascular diseases.
 
Overall design Human umbilical vein endothelial cells (HUVECs) were seeded in 0.2% gelatin-coated petri dishes the day before the experiment. The next day, cells were treated with AdNC or Ad-IGFBP6 for 24 hours and with or without TNF-α (10ng/ml) for 6 hours. After treatment, total RNA was isolated using the RNeasy kit. RNA libraries were prepared for sequencing using the rRNA removal library construction protocol.
 
Contributor(s) Su M, Zhao W, Xu S, Weng J
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 24, 2024
Last update date May 01, 2024
Contact name Meiming Su
E-mail(s) Sumeiming@mail.ustc.edu.cn
Organization name USTC
Street address Huangshan Road
City Hefei
ZIP/Postal code 230026
Country China
 
Platforms (1)
GPL30209 MGISEQ-2000RS (Homo sapiens)
Samples (9)
GSM8229226 Contorl1
GSM8229227 Contorl2
GSM8229228 Contorl3
Relations
BioProject PRJNA1104204

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE265787_gene_expression.xls.gz 1.5 Mb (ftp)(http) XLS
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Raw data are available in SRA

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