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Series GSE27130 Query DataSets for GSE27130
Status Public on Dec 31, 2011
Title Anti-cancer drug sensitive DNA methylation marker research
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of normal and colon cancer and assosiation study between anti-cancer drug respond group and non-respond group. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in 118 paired anti-cancer drug response tested colon cancer and adjacent normal tissues
 
Overall design Bisulphite converted DNA from the 248 samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Kim J
Citation(s) 21298349
Submission date Feb 08, 2011
Last update date Jan 02, 2015
Contact name Han-Chul Lee
Organization name KRIBB
Department Medical Genome Research Center
Street address 111 Gwahangno, Yuseong-gu
City Daejeon
ZIP/Postal code 305-806
Country South Korea
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (248)
GSM670201 genomic DNA from colon cancer adjacent normal tissue_CRC2001N
GSM670202 genomic DNA from colon cancer tissue_CRC2001T
GSM670203 genomic DNA from colon cancer adjacent normal tissue_CRC2002N
Relations
BioProject PRJNA137719

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27130_RAW.tar 5.8 Mb (http)(custom) TAR
GSE27130_non-normalized.txt.gz 34.7 Mb (ftp)(http) TXT
Processed data included within Sample table
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