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Series GSE28029 Query DataSets for GSE28029
Status Public on Mar 11, 2012
Title MicroRNAs Associated with Metastatic Prostate Cancer
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To identify genes with the potential target of differentially expressed miRNA in metastatic prostate cancer, we have employed whole genome microarray expression profiling. Transplantable metastatic versus a non-metastatic prostate cancer xenograft line, both derived from one patient’s primary cancer, were developed via sub-renal capsule grafting of cancer tissue into NOD/SCID mice. The same RNA samples from both lines were also used for miRNA sequencing. Overlapped genes of predicted targets of differentially expressed miRNAs and differentially expressed in microarray platform showed potential markers of combination of miRNA and gene in metastatic prostate cancer.
 
Overall design Gene expression in metastatic/non-metastatic prostate cancer was measured. Same total RNA samples were used for small RNA library construction for miRNA sequencing.

This submission represents the gene expression component of the study.
 
Contributor(s) Watahiki A, Wang Y, Wang Y
Citation(s) 21980368
Submission date Mar 17, 2011
Last update date Jan 23, 2019
Contact name Yuzhuo Wang
E-mail(s) ywang@bccrc.ca
Phone 604-675-8013
Fax 604-675-8019
Organization name BC Cancer Research Centre
Department Experimetnal Therapeutics
Lab YZ Wang
Street address 675 West 10th Avenue
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (2)
GSM693281 LTL313H
GSM693282 LTL313B
Relations
BioProject PRJNA137979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28029_RAW.tar 4.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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