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Series GSE30640 Query DataSets for GSE30640
Status Public on Oct 31, 2011
Title Changes in DNA methylation In cultered WI-38 cells over passages
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary We used Illumina infinium methylation array analysis to document spontaneous DNA methylation changes in human fibroblasts growing in long term culture. Starting with a culture derived from a single cell we compared the methylation profile of late passage clones with that of the initial culture, allowing unambiguous identification of methylation changes.
 
Overall design Bisulphite converted DNA from the 5 samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Eden A, Ron-Bigger S, Bocker M, Michlin D, Isaac S, Lyko F
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Submission date Jul 13, 2011
Last update date Jan 02, 2015
Contact name Amir Eden
E-mail(s) eden@vms.huji.ac.il
Phone 7226584981
Fax 7226585417
Organization name Hebrew University
Department Cell & Developmental Biology
Street address Givat Ram
City Jerusalem
ZIP/Postal code 91904
Country Israel
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (5)
GSM759853 WI-38 primary culture
GSM759854 WI-38 7-2
GSM759855 WI-38 Clone 3
Relations
BioProject PRJNA144637

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30640_RAW.tar 5.8 Mb (http)(custom) TAR
GSE30640_non-normalized.txt.gz 927.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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