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Series GSE30894 Query DataSets for GSE30894
Status Public on Jul 27, 2011
Title Role of miR-19b and its target mRNAs on 5-fluorouracil resistance in colon cancer cells
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Despite the efforts in defining the molecular mechanisms for the drug resistance in colorectal cancers, little is known about the roles of microRNAs. With microarray containing 723 microRNAs, we examined effect of 5-fluorouracil (5-FU) on the microRNA expression. Respond to 5-FU, we identify two microRNAs, miR-19b and miR-21, that were differentially expressed in 5-FU resistant colon cancer cells derived from KM12C and DLD-1.
 
Overall design DLD-1, DLD-1/R, KM12C, and KM12C/R cells were plated at 1 × 105 cells/well. After pre-culture, cells were treated with 60 uM of 5-FU for 72 h. This was the same condition as the analysis of cell cycle. RNAs were collected before (0 h) and after the treatment of 5-FU (72 h).
 
Citation(s) 22382630
Submission date Jul 25, 2011
Last update date Jul 21, 2014
Contact name Toshihito Tanahashi
E-mail(s) tana@basic.med.tokushima-u.ac.jp
Organization name Tokushima University
Street address Kuramoto-cho 3-18-15
City Tokushima-city
ZIP/Postal code 7708503
Country Japan
 
Platforms (1)
GPL8227 Agilent-019118 Human miRNA Microarray 2.0 G4470B (miRNA ID version)
Samples (8)
GSM766161 5FU_01
GSM766162 5FU_02
GSM766163 5FU_03
Relations
BioProject PRJNA144233

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30894_RAW.tar 14.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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