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Series GSE32098 Query DataSets for GSE32098
Status Public on Sep 14, 2011
Title Blood vessels restrain pancreas branching, differentiation and growth
Organism Mus musculus
Experiment type Expression profiling by array
Summary How organ size and form are controlled during development is a major question of biology. Blood vessels have been shown to be essential for early development of the liver and pancreas, and are fundamental to normal and pathological tissue growth. Here we report that non-nutritional signals from blood vessels surprisingly act to restrain pancreas growth. Elimination of endothelial cells increases the size of embryonic pancreatic buds. Conversely, VEGF-induced hypervascularization decreases pancreas size. The growth phenotype results from vascular restriction of pancreatic tip cell formation, lateral branching and differentiation of the pancreatic epithelium into endocrine and acinar cells. The effects are seen both in vivo and ex vivo, indicating a perfusion-independent mechanism. Thus the vasculature controls pancreas morphogenesis and growth by reducing branching and differentiation of primitive epithelial cells.
 
Overall design For transcriptome analysis, RNA was isolated using QIAGEN RNeasy micro Kit from pancreatic buds of Pdx1-tTA (n=3) and littermate Pdx1-tTA; TET-VEGF (n=3) e12.5 embryos, or from e12.5 wild type pancreatic buds explanted and treated with VEGFR2i (n=5) or vehicle (n=5) for 2 days. Pooled samples were hybridized to Affymetrix mouse gene 1.0 st arrays. The arrays were RMA normalized using Partek Genomic Suite 6.5. Differentially regulated genes were selected based on p-values and ratios using t-test.
 
Contributor(s) Magenheim J, Ilovich O, Lazarus A, Klochendler A, Ziv O, Werman R, Hija A, Cleaver O, Mishani E, Keshet E, Dor Y
Citation(s) 21965615
Submission date Sep 13, 2011
Last update date Mar 04, 2019
Contact name Yuval Dor
E-mail(s) yuvald@ekmd.huji.ac.il
Organization name Hadassah medical school
Street address ein-karem
City jerusalem
ZIP/Postal code 91120
Country Israel
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM795708 Pdx1-tTA; TET-VEGF
GSM795709 Pdx1-tTA; TET-VEGF TR
GSM795710 Pdx1-tTA
Relations
BioProject PRJNA147551

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32098_RAW.tar 30.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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