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Series GSE32604 Query DataSets for GSE32604
Status Public on Nov 01, 2011
Title Distal airway stem cells yield alveoli in vitro and during lung regeneration following H1N1 influenza infection (stem cell clones NESC,TASC,DASC)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The extent of lung regeneration following catastrophic damage and the potential role of adult stem cells in such a process remains obscure. Sublethal infection of mice with an H1N1 influenza virus related to that of the 1918 pandemic triggers massive airway damage followed by apparent regeneration. We show here that p63-expressing stem cells in the bronchiolar epithelium undergo rapid proliferation after infection and radiate to interbronchiolar regions of alveolar ablation. Once there, these cells assemble into discrete, Krt5+ pods and initiate expression of markers typical of alveoli. Gene expression profiles of these pods suggest that they are intermediates in the reconstitution of the alveolar-capillary network eradicated by viral infection. The dynamics of this p63-expressing stem cell in lung regeneration mirrors our parallel findings that defined pedigrees of human distal airway stem cells assemble alveoli-like structures in vitro and suggests new therapeutic avenues to acute and chronic airway disease.
 
Overall design The long-term self-renewal potential of the putative human stem cell clones (NESC,TASC,DASC) allowed us to isolate independent pedigrees for the analysis of the progeny of a single cell. Expansion of these lines yielded abundant immature cells of known pedigree for a range of differentiation assays to assess lineage potential. All stem cells were grown on feeder layer (3T3).NESC were differentiated using Air liquid interface system (ALI), 3D matrigel system (MAT) and Self assembling sphere culture(SAS). The differentiation potential of TASC and DASC were studied using ALI and MAT systems.
 
Contributor(s) Kumar PA, Hu Y, Yamamoto Y, Hoe NB, Wei TS, Mu D, Sun Y, Joo LS, Daghers R, Zielonka E, Wang DY, Chow VT, Crum CP, Xian W, McKeon F
Citation(s) 22036562
Submission date Oct 04, 2011
Last update date Feb 18, 2019
Contact name Frank Daniel McKeon
E-mail(s) mckeonf@gis.a-star.edu.sg, Wa.Xian_imb.a-star.edu.sg
Organization name Genome Institute of Singapore
Department Stem cell and Developmental Biology 7
Street address 60 Biopolis street
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (28)
GSM808352 DASC-3T3-1
GSM808353 DASC-3T3-2
GSM808354 DASC-3T3-3
This SubSeries is part of SuperSeries:
GSE32606 Distal airway stem cells yield alveoli in vitro and during lung regeneration following H1N1 influenza infection
Relations
BioProject PRJNA154455

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32604_RAW.tar 580.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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