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Series GSE33287 Query DataSets for GSE33287
Status Public on Mar 30, 2012
Title Unique signatures of estrogen independent growth of MCF-7 cells in low-estrogen versus complete estrogen depravation
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Despite the success of the aromatase inhibitors (AIs) in treating estrogen receptor positive breast cancer, 15-20% of patients receiving adjuvant AIs will relapse within 5-10 years of treatment initiation. Long term estrogen deprivation (LTED) of breast cancer cells in culture has been successfully used to mimic AI-induced estrogen depletion to dissect mechanisms of AI resistance. However, we hypothesized that a subset of patients receiving AI therapy may maintain low circulating concentrations of estrogens that influence the development of endocrine resistance. We sought to expand established LTED models to account for these observations. MCF-7 cells were grown in medium with charcoal stripped serum supplemented with defined concentrations of E2 or the estrogenic androgen metabolite 3βAdiol. Cells were selected in the EC10 and EC90 of E2 or 3βAdiol, or estrogen deprived. Estrogen-independence was evaluated during selection by assessing cell growth in the absence or presence of E2 or 3βAdiol. Following >7 months of selection, estrogen-independence developed in estrogen-deprived cells and cells maintained in low concentrations of steroid hormone. Functional analyses demonstrated that estrogen-deprived and low-steroid selected cells developed estrogen-independence via unique mechanisms, independent and dependent of ERα, respectively. Estrogen-independent growth in low-steroid selected cells could be blocked by kinase inhibitors. However, these cells were completely resistant to kinase inhibition in the presence of low steroid hormone concentrations. These data offer a novel perspective on the development of resistance to AI therapy, and may yield novel approaches to treat AI-resistant tumors.
 
Overall design MCF-7 cells were selected for >7months in IMEM+10% Charcoal Stripped FBS, supplmented with defined steroid hormone conditions. Following outgrowth of estrogen-independent cells, cell lines were grown in estrogen-free conditions and gene expression analysis was performed to identify drivers of estrogen-independent growth. Cells were assessed in biological triplicates.
 
Contributor(s) Sikora MJ, Strumba V, Lippman ME, Johnson MD, Rae JM
Citation(s) 22456984
Submission date Oct 27, 2011
Last update date Aug 13, 2018
Contact name Viktoriya Strumba
Organization name University of Michigan
Street address 109 Zina Pitcher place
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (15)
GSM823414 MCF7_LTED_vehicle_rep1
GSM823415 MCF7_LTED_vehicle_rep2
GSM823416 MCF7_LTED_vehicle_rep3
Relations
BioProject PRJNA149285

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33287_RAW.tar 26.2 Mb (http)(custom) TAR
GSE33287_non-normalized.txt.gz 2.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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