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Series GSE33592 Query DataSets for GSE33592
Status Public on Jun 18, 2012
Title Wide-scale analysis of alternative polyadenylation (APA) associated with proliferation and transformation using 3'-Seq
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary We mapped and quantified poly(A) sites in BJ and MCF10A cells under proliferative, arrested and transformed states
 
Overall design Two human cell lines (BJ and MCF10A) examined under proliferative, arrested and transformed states
 
Contributor(s) Elkon R, Agami R
Citation(s) 22747694
Submission date Nov 09, 2011
Last update date May 15, 2019
Contact name Ran Elkon
Organization name Tel Aviv University
Department Human Genetics
Street address Ramat Aviv
City Tel Aviv
ZIP/Postal code 69494
Country Israel
 
Platforms (2)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (10)
GSM830448 BJ proliferative (reads len 35)
GSM830449 BJ confluent (reads len 35)
GSM830450 BJ RAS-transformed (reads len 35)
Relations
SRA SRP009276
BioProject PRJNA148533

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33592_RAW.tar 231.9 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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