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| Status |
Public on Nov 13, 2014 |
| Title |
Gene expression signatures for Nanog-positive and Nanog-negative hepatocellular carcinoma cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Whole genome microarray expression profiling of HCC cell line (Huh7) and patients derive primary HCC cells (T1115 and T1224) expressing Nanog or not. Results provide insight into the role of Nanog in transcriptional regulation.
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| Overall design |
Using Nanog promoter as a reporter system, we sorted the Nanog-positive and Nanog-negative cells from Huh7, T1115 and T1224 by FACS, respectively. Each group is composed of a Nanog negative control and two independent Nanog positive samples.
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| Contributor(s) |
Shan J, Shen J, Liu L, Xia F, Xu C, Duan G, Xu Y, Ma Q, Yang Z, Zhang Q, Ma L, Liu J, Xu S, Yan X, Bie P, Cui Y, Bian X, Qian C |
| Citation(s) |
22473773 |
| Submission date |
Nov 16, 2011 |
| Last update date |
Jan 23, 2019 |
| Contact name |
junjie shen |
| Organization name |
Institute of Pathology and Southwest Cancer Center
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| Street address |
Gaotanyan 30, Shapingba District
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| City |
Chong qing |
| ZIP/Postal code |
400038 |
| Country |
China |
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| Platforms (1) |
| GPL6480 |
Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA148425 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE33741_RAW.tar |
19.5 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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