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Series GSE36426 Query DataSets for GSE36426
Status Public on Oct 05, 2012
Title The MET oncogene is a functional marker of a glioblastoma stem cell subtype and drives the invasive phenotype
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Eighteen independent neurospheres derived from patients affected by primary glioblastoma were grouped into “classical”, “mesenchymal” or “proneural” subtypes according to analysis of genetic lesions and gene expression profiling. Here we show that expression of the MET oncogene, encoding the tyrosine kinase receptor for HGF, associates with mesenchymal and proneural neurospheres (Met-pos-NS). Met expression is almost absent from classical neurospheres (Met-neg-NS), and mutually exclusive with amplification and expression of the EGF receptor gene.
Met-pos-NS and Met-neg-NS display distinct growth factor requirements, differentiate along divergent pathways, and generate tumors with distinctive histological features. Met-pos-NS contain a variable percentage of Met positive (Methigh) and Met negative (Metneg) cells. After purification, only Methigh cells display clonogenic ability in vitro, and regenerate neurospheres containing both Methigh and Metneg cells. After in vivo transplantation, Methigh cells display highly enriched tumorigenic potential as compared with Metneg cells. At functional level, in Methigh cells, HGF concomitantly sustains proliferation, clonogenicity, expression of self-renewal markers, migration and invasion. These data show that Met is a functional marker of glioblastoma stem cells, and a candidate target for molecular diagnosis and therapy of a glioblastoma subset.
 
Overall design 37 samples (17 replicate samples and 1 triplicate sample)
 
Contributor(s) Medico E, De Bacco F, Boccaccio C
Citation(s) 22738909
Submission date Mar 11, 2012
Last update date Aug 13, 2018
Contact name Enzo Medico
E-mail(s) enzo.medico@ircc.it
Phone +39-011-9933234
Organization name Candiolo Cancer Institute, University of Torino
Department Oncology
Lab Laboratory of Oncogenomics
Street address Strada Prov. 142, km 3,95
City Candiolo
State/province TO
ZIP/Postal code 10060
Country Italy
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (37)
GSM893131 BT168_A
GSM893132 BT168_B
GSM893133 BT205_A
Relations
BioProject PRJNA153229

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36426_RAW.tar 26.2 Mb (http)(custom) TAR
GSE36426_non-normalized.txt.gz 6.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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