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Series GSE36563 Query DataSets for GSE36563
Status Public on Jan 04, 2016
Title Human pancreatic adenocarcinoma contains a side population resistant to gemcitabine
Organism Homo sapiens
Experiment type Expression profiling by array
Summary BACKGROUND:
Therapy resistance remains one of the major challenges to improve the prognosis of patients with pancreatic cancer. Chemoresistant cells, which potentially also display cancer stem cell (CSC) characteristics, can be isolated using the side population (SP) technique. Our aim was to search for a SP in human pancreatic ductal adenocarcinoma (PDAC) and to examine its chemoresistance and CSC phenotype.

RESULTS:
A SP was identified in all PDAC samples, expanded and analyzed as first-generation xenografts. This SP was more resistant to gemcitabine than the other tumour cells as analyzed in vivo. Whole-genome expression profiling of the SP revealed upregulation of genes related to therapy resistance, apoptotic regulation and epithelial-mesenchymal transition. In addition, the SP displayed higher tumourigenic (CSC) activity than the other main tumour cell population (MP) as analyzed in vitro by sphere-forming capacity.

CONCLUSION:
We identified a SP in human PDAC and uncovered a chemoresistant and CSC-associated phenotype. This SP may represent a new therapeutic target in pancreatic cancer.
 
Overall design Micro-array analysis was performed on SP and MP samples of 5 xenografts, grown from 5 different human PDAC samples.
 
Contributor(s) Van den broeck A, Gremeaux L, Vankelecom H, Topal B
Citation(s) 22894607
Submission date Mar 16, 2012
Last update date Jan 23, 2019
Contact name Rekin's Janky
E-mail(s) Nucleomics.Bioinformatics@vib.be
Organization name VIB
Department Nucleomics Core
Street address Herestraat 49 Box 816
City Leuven
ZIP/Postal code B-3000
Country Belgium
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (10)
GSM896924 6360
GSM896925 6361
GSM896926 6362
Relations
BioProject PRJNA153397

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36563_RAW.tar 19.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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