|
| Status |
Public on May 04, 2012 |
| Title |
Effects of knockdown of Jmjd6 on human umbilical vein endothelial cells - gene and exon expression |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Human umbilical vein endothelial cells (HUVECs) were incubated for 48 h after transfection of scrambled siRNA or siRNA targeting Jmjd6 .
Changes in transcript and exon levels were analyzed.
|
| |
|
| Overall design |
6 samples; 2 conditions: Scrambled siRNA vs. siJmjd6 ; 3 replicates per condition
|
| |
|
| Contributor(s) |
Boeckel JN, Guarani V, Koyanagi M, Roexe T, Lengeling A, Schermuly RT, Gellert P, Braun T, Zeiher AM, Dimmeler S |
| Citation(s) |
21300889 |
| Submission date |
May 03, 2012 |
| Last update date |
Feb 18, 2019 |
| Contact name |
niels boeckel |
| Organization name |
University Frankfurt
|
| Department |
Institut for Cardiovascular Regenration
|
| Lab |
Centre for Molecular Medicine
|
| Street address |
Theodor-Stern-Kai 7
|
| City |
Frankfurt |
| ZIP/Postal code |
60590 |
| Country |
Germany |
| |
|
| Platforms (2) |
| GPL5175 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] |
| GPL5188 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
| Samples (12)
|
| GSM926651 |
siRNA-Scrambled HUVEC for 48h (exon level) rep1 |
| GSM926652 |
siRNA-Scrambled HUVEC for 48h (exon level) rep2 |
| GSM926653 |
siRNA-Scrambled HUVEC for 48h (exon level) rep3 |
| GSM926654 |
siRNA-Jmjd6 HUVEC for 48h (exon level) rep1 |
| GSM926655 |
siRNA-Jmjd6 HUVEC for 48h (exon level) rep2 |
| GSM926656 |
siRNA-Jmjd6 HUVEC for 48h (exon level) rep3 |
| GSM926657 |
siRNA-Scrambled HUVEC for 48h (gene level) rep1 |
| GSM926658 |
siRNA-Scrambled HUVEC for 48h (gene level) rep2 |
| GSM926659 |
siRNA-Scrambled HUVEC for 48h (gene level) rep3 |
| GSM926660 |
siRNA-Jmjd6 HUVEC for 48h (gene level) rep1 |
| GSM926661 |
siRNA-Jmjd6 HUVEC for 48h (gene level) rep2 |
| GSM926662 |
siRNA-Jmjd6 HUVEC for 48h (gene level) rep3 |
|
| Relations |
| BioProject |
PRJNA163237 |
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