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GEO accession:
Series GSE38275
Query DataSets for GSE38275
Status
Public on Jul 02, 2014
Title
ChIP-seq and RIP-seq for SCML2 and SCML2 mutants in 293T-REx and K562 cells
Organism
Homo sapiens
Experiment type
Other
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
24986859
Submission date
May 25, 2012
Last update date
Feb 04, 2022
Contact name
Roberto Bonasio
Organization name
University of Pennsylvania
Department
Cell and Developmental Biology
Lab
Bonasio
Street address
3400 Civic Center Blvd - SCTR 9-111
City
Philadelphia
State/province
PA
ZIP/Postal code
19104
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (49)
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GSM937858
293Trex_N3.input
GSM937859
293Trex_N3.HA
GSM937860
293Trex_N3.SCML2
GSM937861
293Trex_N3.BMI1
GSM937862
293Trex_N3-SCML2A.input
GSM937863
293Trex_N3-SCML2A.HA
GSM937864
293Trex_N3-SCML2A.SCML2
GSM937865
293Trex_N3-SCML2A.BMI1
GSM937866
293Trex_N3-SCML2AdRBR.input
GSM937867
293Trex_N3-SCML2AdRBR.HA
GSM937868
293Trex_N3-SCML2AdRBR.SCML2
GSM937869
293Trex_N3-SCML2AdRBR.BMI1
GSM937870
K562.input
GSM937871
K562.SCML2
GSM937872
K562.BMI1
GSM937873
K562.DMSO.input.PA
GSM937874
K562.DMSO.SCML2.PA
GSM937875
K562.hemin.input.PA
GSM937876
K562.hemin.SCML2.PA
GSM937877
K562.PMA.input.PA
GSM937878
K562.PMA.SCML2.PA
GSM1424568
293Trex_N3m.input.b3
GSM1424569
293Trex_N3.HA.b3
GSM1424570
293Trex_N3.SCML2.b3
GSM1424571
293Trex_N3.BMI1.b3
GSM1424572
293Trex_N3-SCML2A.input.b3
GSM1424573
293Trex_N3-SCML2A.HA.b3
GSM1424574
293Trex_N3-SCML2A.SCML2.b3
GSM1424575
293Trex_N3-SCML2A.BMI1.b3
GSM1424576
293Trex_N3-SCML2AdRBR.input.b3
GSM1424577
293Trex_N3-SCML2AdRBR.HA.b3
GSM1424578
293Trex_N3-SCML2AdRBR.SCML2.b3
GSM1424579
293Trex_N3-SCML2AdRBR.BMI1.b3
GSM1424580
293Trex_N3m.input.b4
GSM1424581
293Trex_N3.HA.b4
GSM1424582
293Trex_N3.SCML2.b4
GSM1424583
293Trex_N3.BMI1.b4
GSM1424584
293Trex_N3-SCML2A.input.b4
GSM1424585
293Trex_N3-SCML2A.HA.b4
GSM1424586
293Trex_N3-SCML2A.SCML2.b4
GSM1424587
293Trex_N3-SCML2A.BMI1.b4
GSM1424588
293Trex_N3-SCML2AdRBR.input.b4
GSM1424589
293Trex_N3-SCML2AdRBR.HA.b4
GSM1424590
293Trex_N3-SCML2AdRBR.SCML2.b4
GSM1424591
293Trex_N3-SCML2AdRBR.BMI1.b4
GSM1424793
293Trex.NE400.PA
GSM1424794
293Trex_N3.HA.PA
GSM1424795
293Trex_N3-SCML2A.HA.PA
GSM1424796
293Trex_N3-SCML2AdRBR.HA.PA
This SuperSeries is composed of the following SubSeries:
GSE38273
ChIP-seq for SCML2 and SCML2 mutants in 293T-REx and K562 cells
GSE38274
RIP-seq for SCML2 and SCML2 mutants in 293T-REx and K562 cells
Relations
BioProject
PRJNA167619
Download family
Format
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Supplementary file
Size
Download
File type/resource
GSE38275_RAW.tar
6.5 Gb
(http)
(custom)
TAR (of BW, WIG)
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