|
| Status |
Public on Jun 01, 2015 |
| Title |
Next generation sequencing facilitates quantitative analysis of GATA2 binding profile in LNCaP cells. |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We find 36,797 high-confidence (p<1E-8) GATA2 binding sites and GATA2 bound primarily to distal elements in LNCaP cells.
|
| |
|
| Overall design |
Examination of GATA2 binding sites in biological duplicate LNCaP samples.
|
| |
|
| Contributor(s) |
Wu D, Ye Z, Wang Q |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jun 01, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Zhenqing Ye |
| E-mail(s) |
yez@uthscsa.edu
|
| Organization name |
The University of Texas Health Science Center at San Antonio
|
| Department |
Department of Molecular Medicine
|
| Street address |
7703 Floyd Curl Drive
|
| City |
San Antonio |
| State/province |
Texas |
| ZIP/Postal code |
78229 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (2) |
|
| This SubSeries is part of SuperSeries: |
| GSE38452 |
A Class of H3K4me1/H3K9me2 marked active GATA2 enhancers directs a GATA2-dependent transcription program underlying prostate cancer progression. |
|
| Relations |
| BioProject |
PRJNA167795 |
| SRA |
SRP013472 |
