|
| Status |
Public on Jun 01, 2015 |
| Title |
Hi-seq 2000 sequencing facilitates quantitative analysis of transcriptomes in LNCaP cells with or without SiGATA2 treatment. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We obtained 1,367 GATA2 up-regulated and 759 GATA2 down-regulated genes (p< 0.001).
|
| |
|
| Overall design |
mRNA profiles of LNCaP cell treated with or without SiGATA2 were generated by deep sequencing in duplicate using Hi-Seq 2000.
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| |
|
| Contributor(s) |
Wu D, Ye Z, Wang Q |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jun 01, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Zhenqing Ye |
| E-mail(s) |
yez@uthscsa.edu
|
| Organization name |
The University of Texas Health Science Center at San Antonio
|
| Department |
Department of Molecular Medicine
|
| Street address |
7703 Floyd Curl Drive
|
| City |
San Antonio |
| State/province |
Texas |
| ZIP/Postal code |
78229 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE38452 |
A Class of H3K4me1/H3K9me2 marked active GATA2 enhancers directs a GATA2-dependent transcription program underlying prostate cancer progression. |
|
| Relations |
| BioProject |
PRJNA167797 |
| SRA |
SRP013473 |
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