|
| Status |
Public on Nov 30, 2012 |
| Title |
Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Capped analysis of gene expression (CAGE) sequencing was done on a normal and a cancer cell line to examine how promoter usage changes between these two states.
|
| |
|
| Overall design |
One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.
|
| |
|
| Contributor(s) |
Statham A |
| Citation(s) |
23245995 |
| Submission date |
Jun 13, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Aaron Statham |
| E-mail(s) |
a.statham@garvan.org.au
|
| Organization name |
Garvan Institute of Medical Research
|
| Department |
Cancer Department
|
| Lab |
Epigenetics Research Laboratory
|
| Street address |
384 Victoria St
|
| City |
Darlinghurst |
| State/province |
NSW |
| ZIP/Postal code |
2010 |
| Country |
Australia |
| |
|
| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (2) |
| GSM947446 |
Transcription Start Site Sequencing of PrEC Cells |
| GSM947447 |
Transcription Start Site Sequencing of LNCaP Cells |
|
| This SubSeries is part of SuperSeries: |
| GSE38685 |
Normal and Cancerous Prostate Cells |
|
| Relations |
| BioProject |
PRJNA168461 |
| SRA |
SRP013725 |
