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Series GSE39417 Query DataSets for GSE39417
Status Public on May 01, 2013
Title Expression profile of the endocrine therapy sensitive breast cancer cells MCF7 depleted of PBX1
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Effect of PBX1 silencing on global gene expression of MCF7 cells stimulated with EGF. The hypothesis tested was that PBX1 is essential for EGF signaling in ERa positive breast cancer cells.
 
Overall design Total RNA was obtained from MCF7 cells treated with siRNA directed at PBX1 or an siControl for 72h. Cells were then stimulated with estradiol (EGF) for 3h prior to RNA extraction.
 
Contributor(s) Magnani L, Lupien M
Citation(s) 23576735
Submission date Jul 17, 2012
Last update date Aug 13, 2018
Contact name luca magnani
E-mail(s) luca.magnani@dartmouth.edu
Phone 6036539932
Fax 6036539952
Organization name Dartmouth College
Department Genetics
Lab Lupien
Street address NCCC one medical drive
City Lebanon
State/province NH
ZIP/Postal code 03756
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (8)
GSM967894 siControl treated with DMSO rep1
GSM967895 siControl treated with EGF rep1
GSM967896 siPBX1 treated with DMSO rep1
This SubSeries is part of SuperSeries:
GSE39418 Genome-wide reprogramming of the chromatin landscape underlies endocrine therapy resistance in breast cancer
Relations
BioProject PRJNA170843

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39417_RAW.tar 26.2 Mb (http)(custom) TAR
GSE39417_non-normalized.txt.gz 2.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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