|
| Status |
Public on Jul 04, 2013 |
| Title |
Induced Cdx2 binding in progenitor motor neurons and its effect on H3K27me3 chromatin domains |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
23955559 |
| Submission date |
Jul 18, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Shaun Mahony |
| E-mail(s) |
mahony@psu.edu
|
| Phone |
814-865-3008
|
| Organization name |
Penn State University
|
| Department |
Biochemistry & Molecular Biology
|
| Lab |
Shaun Mahony
|
| Street address |
404 South Frear Bldg
|
| City |
University Park |
| State/province |
PA |
| ZIP/Postal code |
16802 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
|
| Samples (14)
|
| GSM967946 |
Day5_MN_rep1 |
| GSM967947 |
Day5_MN_rep2 |
| GSM967948 |
Day5_MN_rep3 |
| GSM967949 |
Day5_MN+iCdx2+FGF_rep1 |
| GSM967950 |
Day5_MN+iCdx2+FGF_rep2 |
| GSM967951 |
Day5_MN+iCdx2+FGF_rep3 |
| GSM968709 |
induced V5-tagged Cdx2 (iCdx2-V5) in RA/Hh-derived progenitor motor neurons (Day4) exposed to Dox and FGF [ChIP-Seq] |
| GSM968710 |
induced V5-tagged Cdx2 (iCdx2-V5) in RA/Hh-derived progenitor motor neurons (Day4) exposed to Dox but not FGF [ChIP-Seq] |
| GSM968711 |
H3K27me3 in Day5 cells exposed to Dox(iCdx2) and FGF [ChIP-Seq] |
| GSM968712 |
H3K27me3 in RA/Hh-derived motor neurons (Day5) exposed to Dox(iCdx2), RA, Hh and FGF [ChIP-Seq] |
| GSM968713 |
H3K27me3 in RA/Hh-derived motor neurons (Day5) exposed to RA and Hh [ChIP-Seq] |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE39422 |
Induced Cdx2 binding in progenitor motor neurons and its effect on H3K27me3 chromatin domains [Affymetrix] |
| GSE39433 |
Induced Cdx2 binding in progenitor motor neurons and its effect on H3K27me3 chromatin domains [ChIP-Seq] |
|
| Relations |
| BioProject |
PRJNA170913 |
Less...
More...