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Series GSE39584 Query DataSets for GSE39584
Status Public on Jul 24, 2012
Title Blimp1/Prdm1 governs terminal differentiation of endovascular trophoblast giant cells and defines multipotent progenitors in the developing placenta
Organism Mus musculus
Experiment type Expression profiling by array
Summary Expression profiling of Prdm1 mutant E9.5 placenta was performed using Illumina whole genome V2 arrays. The hypothesis tested in the present study was that Blimp1 regulates the transcription of key genes involved in trophoblast differentiation. We demonstrate that the invading SpA-TGCs display robust Blimp1 expression and Blimp1 functional loss selectively disrupts specification of this discrete TGC sub-type. Transcriptional profiling experiments identified additional SpA-TGC lineage restricted marker genes that potentially regulate placental morphogenesis.
 
Overall design Prdm1BEH/+ (Vincent et al., 2005) animals were intercrossed to generate null placental tissue. Total RNA obtained from 10 Prdm1+/+ and 11 Prdm1-/- E9.5 placenta samples was hybridized to Illumina WG6_V2 beadchips.
 
Contributor(s) Mould A, Morgan M, Li L, Bikoff E, Robertson E
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Submission date Jul 23, 2012
Last update date Jan 16, 2019
Contact name Arne Wyndham Mould
E-mail(s) arne.mould@psych.ox.ac.uk
Organization name Oxford University
Department Psychiatry
Lab Neural Correlates of Gene Function
Street address Warneford Hospital
City Oxford
State/province Oxfordshire
ZIP/Postal code OX3 7JX
Country United Kingdom
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (21)
GSM972544 Placenta (E9.5) Prdm1+/+_1
GSM972545 Placenta (E9.5) Prdm1+/+_2
GSM972546 Placenta (E9.5) Prdm1+/+_3
Relations
BioProject PRJNA171158

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39584_RAW.tar 15.8 Mb (http)(custom) TAR
GSE39584_non-normalized.txt.gz 6.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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