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Series GSE39726 Query DataSets for GSE39726
Status Public on Aug 13, 2013
Title HSC-3 cells (control) vs. HSC-3-5 cells [subcutaneous tumor]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary HSC-3-5 cells, which drived from human HSC-3 cells via transwell invasion assay was high invasive.Tumor cells were injected into the flank of SCID mice. After 6 weeks, transcriptional profiling of human HSC-3 tumor comparing with high invasive HSC-3-5 tumor. Goal was to determine the effects of invasion on global HSC-3-5 gene expression during tumor metastasis.
 
Overall design HSC-3 and HSC-3-5 oral cancer cells were respectively injected into the flank and tongue of SCID mice. After 1 and 6 weeks, total RNA was respectively extracted from the tumor tissue on tongue and flank of SCID mice for gene expression profiling during metastasis. Briefly, two-condition experiment,HSC-3 vs. HSC-3-5 cells.
 
Contributor(s) Chang C, Chen Y
Citation(s) 23834814
Submission date Jul 30, 2012
Last update date Oct 11, 2016
Contact name Yi-Ting Chen
Organization name National Cheng Kung University
Department Department of Medical Laboratory Science and Biotecnology
Lab Dr. Chuan Fa Chang
Street address No. 1 University Road
City Tainan
ZIP/Postal code 70101
Country Taiwan
 
Platforms (1)
GPL14550 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
Samples (2)
GSM978242 HSC-3 subcutaneous tumor
GSM978243 HSC-3-5 subcutaneous tumor
This SubSeries is part of SuperSeries:
GSE39729 HSC-3 cells (control) vs. HSC-3-5 cells
Relations
BioProject PRJNA171615

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39726_RAW.tar 24.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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