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Series GSE39791 Query DataSets for GSE39791
Status Public on Nov 03, 2014
Title Hepatic regeneration gene expression signature predicts late recurrence of hepatocellular carcinoma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary While we and others have uncovered and validated several genomic predictors for metastatic recurrences, a molecular or genomic predictor that can reliably identify high-risk patients for late de novo recurrence has not been firmly established. We analyzed previously reported gene expression data from human livers that underwent partial hepatectomy or transplantation, which were representative physiological conditions that trigger liver regeneration signals. We generated gene expression data from tumor and matched non-tumor surrounding tissues of 72 hepatocellular carcinoma (HCC) patients who underwent surgical resection as the primary treatment. We used these gene expression data to develop a new prognostification model for recurrence of HCC after surgery.
 
Overall design We generated gene expression data from tumor and matched non-tumor surrounding tissues of 72 HCC patients who underwent surgical resection as the primary treatment.
 
Contributor(s) Kim J, Kang K, Lee J, Park Y
Citation(s) 25536056
Submission date Jul 31, 2012
Last update date Aug 13, 2018
Contact name Sangbae Kim
E-mail(s) sangbkim22@gmail.com
Organization name Baylor Colleage of Medicine
Department HGSC
Street address 1 Baylor plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (144)
GSM979051 KM_001T
GSM979052 KM_008T
GSM979053 KM_009T
Relations
BioProject PRJNA171712

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39791_RAW.tar 26.2 Mb (http)(custom) TAR
GSE39791_Raw_MDA_HCC.txt.gz 25.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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