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Series GSE39850 Query DataSets for GSE39850
Status Public on Aug 04, 2012
Title 5 Day Oral Study of A-998679 in Male Sprague Dawley Rats (Jejunum)
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Male Sprague-Dawley rats [Crl:CD®(SD)IGS BR], weighing ~250 g at study initiation were obtained from Charles River Laboratories, Inc. (Wilmington, MA). Rats were housed singly in ventilated, stainless steel, wire-bottom hanging cages and fed non-certified Rodent Chow (Harlan Labs, Madison, WI) and water ad libitum and acclimated for at least 5 days after arrival. Rats were randomly assigned to various treatment groups (3 rats/group) and were dosed once daily by oral gavage with vehicle (0.2% hydroxypropylmethylcellulose at a dose volume of 10 ml/kg) or with 30, 100, or 200 mg/kg of A-998679. All rats were fasted overnight after their last dose, weighed and sacrificed under isoflurane anesthesia. Liver and small intestine (jejunum) were flash frozen in liquid nitrogen and stored at −80°C until processing for gene expression profiling on the Affymetrix platform.
 
Overall design total of 11 samples, 3 biological replicates (rats) from each of 3 treatments groups 1. vehicle control 2. 30mg/kg A-998679 3. 100mg/kg A-998679 and 2 biological replicates from treatment group 4. 200mg/kg A-998679
 
Contributor(s) Liguori M, Ciurlionis R
Citation(s) 23112805
Submission date Aug 02, 2012
Last update date Jul 31, 2017
Contact name Rita Ciurlionis
E-mail(s) rita.ciurlionis@abbvie.com
Phone (847)935-6258
Organization name Abbvie
Street address 1 North Waukegan Road
City North Chicago
State/province IL
ZIP/Postal code 60064
Country USA
 
Platforms (1)
GPL1355 [Rat230_2] Affymetrix Rat Genome 230 2.0 Array
Samples (10)
GSM980389 vehicle-jejunum-rat1
GSM980390 vehicle-jejunum-rat2
GSM980391 vehicle-jejunum-rat3
This SubSeries is part of SuperSeries:
GSE39875 5 Day Oral Study of A-998679 in Male Sprague Dawley Rats
Relations
BioProject PRJNA171928

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39850_RAW.tar 26.2 Mb (http)(custom) TAR (of CEL)
GSE39850_fold_change.txt.gz 68.4 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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