|
| Status |
Public on Aug 04, 2014 |
| Title |
A549 cells before/after NME2 induction |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
25081206 |
| Submission date |
Aug 28, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Vinod Kumar Yadav |
| E-mail(s) |
vinod.yadav@igib.in
|
| Organization name |
IGIB
|
| Department |
Bioinformatics
|
| Street address |
Mall Road
|
| City |
Delhi |
| State/province |
Delhi |
| ZIP/Postal code |
110009 |
| Country |
India |
| |
|
| Platforms (3) |
| GPL5082 |
[Hs_PromPR] Affymetrix Human Promoter 1.0R Array |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
| GPL10558 |
Illumina HumanHT-12 V4.0 expression beadchip |
|
| Samples (15)
|
| GSM988175 |
NME2 induced A549 cell Replicate1 |
| GSM988176 |
NME2 induced A549 cell Replicate2 |
| GSM988177 |
NME2 induced A549 cell Replicate3 |
| GSM991046 |
NME2 Chip-seq Replicate 1(after NME2 induced A549) |
| GSM991047 |
NME2 Chip-seq Replicate 2(after NME2 induced A549) |
| GSM991048 |
NME2 Chip-seq Replicate 1(before NME2 induced A549) |
| GSM991049 |
NME2 Chip-seq Replicate 2(before NME2 induced A549) |
| GSM991050 |
IgG (after NME2 induced A549) |
| GSM991051 |
IgG (before NME2 induced A549) |
| GSM993948 |
Nucleosome positions (after NME2 induced A549) |
| GSM993949 |
Nucleosome positions (before NME2 induced A549) |
| GSM993950 |
Nucleosome positions (NME2 depleted A549) |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE40194 |
Expression profile of lung adenocarcinoma, A549 cells following induction of non metastatic 2 (NME2/NM23 H2) |
| GSE40300 |
Genome-wide maps of NME2 in A549 lung adenocarcinoma cells. |
| GSE40363 |
Nucleosome positioning in A549 cells before/after NME2 induction |
|
| Relations |
| BioProject |
PRJNA174033 |
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