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GEO accession:
Series GSE40583
Query DataSets for GSE40583
Status
Public on Jan 10, 2013
Title
FAT1 knockdown in immortalized astrocyte and glioma cell lines
Organism
Homo sapiens
Experiment type
Expression profiling by array
Summary
The FAT1 gene was knocked down using 2 independent siRNAs, in immortalized human astrocytes and U87 and U251 glioma cell lines.
A non-targeted scramble siRNA was used as a control.
Overall design
Scramble, FAT1 siRNA#1 and FAT1 siRNA#2 were transfected into each cell line, in duplicate, and RNA analyzed using the Affymetrix U133A 2.0 platform.
Contributor(s)
Morris LG
,
Chan TA
Citation(s)
23354438
Submission date
Sep 04, 2012
Last update date
Dec 06, 2018
Contact name
Luc GT Morris
Organization name
Memorial Sloan-Kettering Cancer Center
Street address
1275 York Avenue
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platforms (1)
GPL571
[HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array
Samples (18)
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GSM997175
IHA scramble siRNA replicate 1
GSM997176
IHA scramble siRNA replicate 2
GSM997183
IHA FAT siRNA#1 replicate 1
GSM997188
IHA FAT siRNA#1 replicate 2
GSM997189
IHA FAT siRNA#2 replicate 1
GSM997190
IHA FAT siRNA#2 replicate 2
GSM997191
U87 scramble siRNA replicate 1
GSM997192
U87 scramble siRNA replicate 2
GSM997193
U87 FAT1 siRNA#1 replicate 1
GSM997194
U87 FAT1 siRNA#1 replicate 2
GSM997195
U87 FAT1 siRNA#2 replicate 1
GSM997196
U87 FAT1 siRNA#2 replicate 2
GSM997197
U251 scramble siRNA replicate 1
GSM997198
U251 scramble siRNA replicate 2
GSM997199
U251 FAT1 siRNA#1 replicate 1
GSM997200
U251 FAT1 siRNA#1 replicate 2
GSM997201
U251 FAT1 siRNA#2 replicate 1
GSM997202
U251 FAT1 siRNA#2 replicate 2
Relations
BioProject
PRJNA174423
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File type/resource
GSE40583_RAW.tar
32.4 Mb
(http)
(custom)
TAR (of CEL)
Processed data included within Sample table
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