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Series GSE40720 Query DataSets for GSE40720
Status Public on Sep 10, 2012
Title A gene expression signature of PDGF-stimulated fibroblasts
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of platelet-derived growth factor (PDGF)-stimulated fibroblasts. Results provide insight into novel pro-tumorigenic factors induced by PDGF-activation of fibroblasts.
 
Overall design 1.2 x 10e6 BJ-hTERT fibroblasts were cultured in 10cm dish with Dulbecco's Modified Eagle Medium (DMEM; Gibco Life Technologies, Gergy-Pontoise, France) containing 1% heat-inactivated fetal calf serum (FCS), 2 mM L-glutamine, penicillin (100 units/ml) and streptomycin (100 ng/ml) at 37ºC in a 5% CO2 humidified atmosphere during 24h. Cultures were stimulated with or without 20ng/mL PDGF-BB (Peprotech, New Jersey, USA) for another 24h prior to harvest. Unstimulated fibroblasts were used as control samples. Cultures of both unstimulated and stimulated fibroblasts were done in triplicate.
 
Contributor(s) Peña C
Citation(s) 23243022, 30250018
Submission date Sep 09, 2012
Last update date May 17, 2019
Contact name Cristina Peña
E-mail(s) cpena@idiphim.org
Organization name Hospital Universitario Puerta de Hierro, Majadahonda
Street address Joaquín Rodrigo,2
City Majadahonda
State/province Madrid
ZIP/Postal code 28222
Country Spain
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (6)
GSM999770 BJHTERT-plus PDGFBB, replicate 1
GSM999771 BJHTERT-minus PDGFBB, replicate 1
GSM999772 BJHTERT-plus PDGFBB, replicate 2
Relations
BioProject PRJNA174750

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40720_RAW.tar 6.2 Mb (http)(custom) TAR
GSE40720_non-normalized.txt.gz 2.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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