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Series GSE40772 Query DataSets for GSE40772
Status Public on Mar 01, 2013
Title Differences in miRNA Detection Levels are Technology and Sequence Dependent [Affymetrix array]
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary We undertook an integrative technological approach to compare miRNA detection capability of three high-throughput commercial platforms.
 
Overall design We artificially introduced human precursor, 2’-O-methyl modified and mature spiked-in miRNAs in a controlled fashion into native human placenta total RNA.
 
Contributor(s) Leshkowitz D, Horn-Saban S, Parmet Y, Feldmesser E
Citation(s) 23431331
Submission date Sep 11, 2012
Last update date May 02, 2017
Contact name Dena Leshkowitz
E-mail(s) dena.leshkowitz@weizmann.ac.il
Organization name Weizmann Institute of Science
Department Bioinformatics Unit, Life Sciences Core Facilities
Street address P.O.B. 26
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL14613 [miRNA-2] Affymetrix Multispecies miRNA-2 Array
Samples (14)
GSM1001136 mix1 rep1
GSM1001137 mix2 rep1
GSM1001138 mix3 rep1
This SubSeries is part of SuperSeries:
GSE40820 Differences in miRNA Detection Levels are Technology and Sequence Dependent
Relations
BioProject PRJNA175038

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40772_RAW.tar 9.5 Mb (http)(custom) TAR (of CEL)
GSE40772_matrix_data_filtered.txt.gz 27.4 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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