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Series GSE40819 Query DataSets for GSE40819
Status Public on Mar 01, 2013
Title Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS]
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We undertook an integrative technological approach to compare miRNA detection capability of three high-throughput commercial platforms.
 
Overall design We artificially introduced human precursor, 2’-O-methyl modified and mature spiked-in miRNAs in a controlled fashion into native human placenta total RNA.
 
Contributor(s) Leshkowitz D, Horn-Saban S, Parmet Y, Feldmesser E
Citation(s) 23431331
Submission date Sep 12, 2012
Last update date May 15, 2019
Contact name Dena Leshkowitz
E-mail(s) dena.leshkowitz@weizmann.ac.il
Organization name Weizmann Institute of Science
Department Bioinformatics Unit, Life Sciences Core Facilities
Street address P.O.B. 26
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (14)
GSM1002540 mix1-rep1
GSM1002541 mix2-rep1
GSM1002542 mix3-rep1
This SubSeries is part of SuperSeries:
GSE40820 Differences in miRNA Detection Levels are Technology and Sequence Dependent
Relations
BioProject PRJNA175040
SRA SRP015725

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40819_NGS_processed_data.txt.gz 46.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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